Gene detail information of Glyur000126s00013656 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G65640.1 | 3.00E-69 | beta HLH protein 93 |
| NR | XP_003517154.1 | 0 | PREDICTED: transcription factor bHLH93-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9LSL1|BH093_ARATH | 6.00E-83 | Transcription factor bHLH93 |
| trEMBL | tr|I1J4X0|I1J4X0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G02390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00126 | 213127 | 215360 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000126s00013656.1 | PF00010.21 | HLH | 176 | 219 | 2.60E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 98.357 |
| SRR1783600 | control | 99.097 |
| SRR1783602 | moderate drought stress | 71.698 |
| SRR1811619 | moderate drought stress | 72.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 108.694 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 107.691 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.897 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.839 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 88.723 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 88.369 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.030 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.402 |
| SRR2868004 | Drought Stress (root) | 11.324 |
| SRR2967015 | Control (root) | 13.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.601 |
| SRR9715740 | Leaf | 0.035 |
| SRR9715741 | Leaf | 0.091 |
| SRR9715739 | Root | 2.147 |
| SRR9715742 | Root | 17.616 |
| SRR9715743 | Root | 15.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.329 |
| SRR8749028 | MeJA induced 9h | 1.442 |
| SRR8749029 | MeJA induced 9h | 2.024 |
| SRR8749030 | Uninduced | 0.158 |
| SRR8749031 | Uninduced | 0.149 |
| SRR8749032 | Uninduced | 0.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 64.894 |
| SRR8400027 | Control - Root | 90.582 |