Gene detail information of Glyur000126s00013644 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64500.1 | 1.00E-161 | Major facilitator superfamily protein |
| NR | XP_006587590.1 | 0 | PREDICTED: probable sphingolipid transporter spinster homolog 2-like isoform X2 [Glycine max] |
| COG | YP_003956009.1 | 3.00E-40 | major facilitator family transporter [Stigmatella aurantiaca DW4/3-1] |
| Swissprot | tr|Q9FLG8|SPNS2_ARATH | 0 | Probable sphingolipid transporter spinster homolog 2 |
| trEMBL | tr|K7LF19|K7LF19_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G33680.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00126 | 65902 | 75276 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000126s00013644.1 | PF07690.11 | MFS_1 | 46 | 417 | 3.40E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.536 |
| SRR1783600 | control | 15.502 |
| SRR1783602 | moderate drought stress | 16.856 |
| SRR1811619 | moderate drought stress | 16.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.340 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.278 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.114 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.301 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.237 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.459 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.080 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 32.629 |
| SRR2868004 | Drought Stress (root) | 39.446 |
| SRR2967015 | Control (root) | 39.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.531 |
| SRR9715740 | Leaf | 24.163 |
| SRR9715741 | Leaf | 23.180 |
| SRR9715739 | Root | 20.623 |
| SRR9715742 | Root | 24.523 |
| SRR9715743 | Root | 23.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.527 |
| SRR8749028 | MeJA induced 9h | 16.322 |
| SRR8749029 | MeJA induced 9h | 12.969 |
| SRR8749030 | Uninduced | 9.201 |
| SRR8749031 | Uninduced | 6.400 |
| SRR8749032 | Uninduced | 5.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.715 |
| SRR8400027 | Control - Root | 37.926 |