Gene detail information of Glyur000125s00010034 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35160.1 | 1.00E-10 | O-methyltransferase family protein |
| NR | KEH29115.1 | 7.61E-28 | flavonoid O-methyltransferase-like protein [Medicago truncatula] |
| Swissprot | tr|P0DH60|M3OM2_PEA | 1.00E-11 | (+)-6a-hydroxymaackiain 3-O-methyltransferase 2 |
| trEMBL | tr|A0A072UT99|A0A072UT99_MEDTR | 3.00E-28 | Flavonoid O-methyltransferase-like protein {ECO:0000313|EMBL:KEH29115.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00125 | 188294 | 189282 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000125s00010034.1 | PF08100.6 | Dimerisation | 107 | 137 | 1.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 53.107 |
| SRR1783600 | control | 52.687 |
| SRR1783602 | moderate drought stress | 15.140 |
| SRR1811619 | moderate drought stress | 14.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.632 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.435 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.911 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.187 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.320 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 248.172 |
| SRR2868004 | Drought Stress (root) | 195.767 |
| SRR2967015 | Control (root) | 199.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.202 |
| SRR9715740 | Leaf | 0.067 |
| SRR9715741 | Leaf | 0.037 |
| SRR9715739 | Root | 13.290 |
| SRR9715742 | Root | 37.100 |
| SRR9715743 | Root | 27.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.212 |
| SRR8749028 | MeJA induced 9h | 0.131 |
| SRR8749029 | MeJA induced 9h | 0.078 |
| SRR8749030 | Uninduced | 0.349 |
| SRR8749031 | Uninduced | 0.363 |
| SRR8749032 | Uninduced | 0.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 100.913 |
| SRR8400027 | Control - Root | 113.166 |