Gene detail information of Glyur000125s00010033 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35160.1 | 1.00E-10 | O-methyltransferase family protein |
| NR | KEH29115.1 | 3.06E-28 | flavonoid O-methyltransferase-like protein [Medicago truncatula] |
| Swissprot | tr|P0DH60|M3OM2_PEA | 2.00E-12 | (+)-6a-hydroxymaackiain 3-O-methyltransferase 2 |
| trEMBL | tr|A0A072UT99|A0A072UT99_MEDTR | 1.00E-28 | Flavonoid O-methyltransferase-like protein {ECO:0000313|EMBL:KEH29115.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00125 | 188050 | 188280 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000125s00010033.1 | PF08100.6 | Dimerisation | 42 | 72 | 3.10E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 91.887 |
| SRR1783600 | control | 93.900 |
| SRR1783602 | moderate drought stress | 25.976 |
| SRR1811619 | moderate drought stress | 24.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 40.724 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.361 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.172 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.234 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.593 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 975.073 |
| SRR2868004 | Drought Stress (root) | 768.900 |
| SRR2967015 | Control (root) | 753.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.492 |
| SRR9715740 | Leaf | 0.126 |
| SRR9715741 | Leaf | 0.339 |
| SRR9715739 | Root | 57.064 |
| SRR9715742 | Root | 146.623 |
| SRR9715743 | Root | 125.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.335 |
| SRR8749028 | MeJA induced 9h | 0.554 |
| SRR8749029 | MeJA induced 9h | 0.098 |
| SRR8749030 | Uninduced | 0.658 |
| SRR8749031 | Uninduced | 1.013 |
| SRR8749032 | Uninduced | 0.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 456.614 |
| SRR8400027 | Control - Root | 532.925 |