Gene detail information of Glyur000125s00010020 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52170.2 | 2.00E-27 | DNA binding |
| NR | XP_004496151.1 | 0 | PREDICTED: uncharacterized protein LOC101504590 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1NHQ9|I1NHQ9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G33210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00125 | 116055 | 119369 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.139 |
| SRR1783600 | control | 22.184 |
| SRR1783602 | moderate drought stress | 19.689 |
| SRR1811619 | moderate drought stress | 19.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.086 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.172 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.552 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.196 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.238 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.036 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.537 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.234 |
| SRR2868004 | Drought Stress (root) | 11.778 |
| SRR2967015 | Control (root) | 10.813 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.192 |
| SRR9715740 | Leaf | 8.203 |
| SRR9715741 | Leaf | 4.882 |
| SRR9715739 | Root | 1.640 |
| SRR9715742 | Root | 12.174 |
| SRR9715743 | Root | 10.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.426 |
| SRR8749028 | MeJA induced 9h | 5.802 |
| SRR8749029 | MeJA induced 9h | 8.672 |
| SRR8749030 | Uninduced | 3.734 |
| SRR8749031 | Uninduced | 3.914 |
| SRR8749032 | Uninduced | 3.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.424 |
| SRR8400027 | Control - Root | 18.945 |