Gene detail information of Glyur000124s00011951 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G35430.1 | 5.00E-08 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| NR | XP_003549742.1 | 6.37E-34 | PREDICTED: CCR4-NOT transcription complex subunit 10-like isoform X1 [Glycine max] |
| trEMBL | tr|K7ML28|K7ML28_SOYBN | 2.00E-34 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G11950.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00124 | 137972 | 138743 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.424 |
| SRR1783600 | control | 19.366 |
| SRR1783602 | moderate drought stress | 14.282 |
| SRR1811619 | moderate drought stress | 13.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.608 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.784 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.074 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.498 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.316 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.576 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.703 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.452 |
| SRR2868004 | Drought Stress (root) | 4.936 |
| SRR2967015 | Control (root) | 6.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.304 |
| SRR9715740 | Leaf | 2.594 |
| SRR9715741 | Leaf | 1.766 |
| SRR9715739 | Root | 1.980 |
| SRR9715742 | Root | 5.911 |
| SRR9715743 | Root | 5.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.572 |
| SRR8749028 | MeJA induced 9h | 4.306 |
| SRR8749029 | MeJA induced 9h | 0.937 |
| SRR8749030 | Uninduced | 0.494 |
| SRR8749031 | Uninduced | 0.510 |
| SRR8749032 | Uninduced | 0.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.954 |
| SRR8400027 | Control - Root | 7.712 |