Gene detail information of Glyur000123s00008443 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59960.1 | 4.00E-132 | |
| NR | XP_003606656.1 | 0 | hypothetical protein MTR_4g063570 [Medicago truncatula] |
| trEMBL | tr|I1LK45|I1LK45_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G15030.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00123 | 242107 | 246408 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.062 |
| SRR1783600 | control | 13.175 |
| SRR1783602 | moderate drought stress | 14.515 |
| SRR1811619 | moderate drought stress | 14.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.409 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.636 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 66.104 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 63.322 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.667 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.252 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.974 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.759 |
| SRR2868004 | Drought Stress (root) | 32.399 |
| SRR2967015 | Control (root) | 30.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.315 |
| SRR9715740 | Leaf | 19.703 |
| SRR9715741 | Leaf | 20.196 |
| SRR9715739 | Root | 9.693 |
| SRR9715742 | Root | 16.077 |
| SRR9715743 | Root | 16.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.964 |
| SRR8749028 | MeJA induced 9h | 63.934 |
| SRR8749029 | MeJA induced 9h | 120.687 |
| SRR8749030 | Uninduced | 46.267 |
| SRR8749031 | Uninduced | 125.382 |
| SRR8749032 | Uninduced | 121.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.124 |
| SRR8400027 | Control - Root | 22.348 |