Gene detail information of Glyur000123s00008435 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59305.1 | 3.00E-07 | |
| NR | XP_007132079.1 | 1.43E-37 | hypothetical protein PHAVU_011G065200g [Phaseolus vulgaris] |
| Swissprot | tr|Q8LDN4|CLE46_ARATH | 3.00E-09 | CLE46p (Precursor) |
| trEMBL | tr|V7AGU0|V7AGU0_PHAVU | 5.00E-38 | Uncharacterized protein {ECO:0000313|EMBL:ESW04073.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00123 | 195313 | 200390 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.051 |
| SRR1783600 | control | 3.147 |
| SRR1783602 | moderate drought stress | 2.045 |
| SRR1811619 | moderate drought stress | 1.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.054 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.945 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.635 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.594 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.255 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.219 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.413 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.190 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.887 |
| SRR2868004 | Drought Stress (root) | 2.099 |
| SRR2967015 | Control (root) | 2.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.635 |
| SRR9715740 | Leaf | 9.043 |
| SRR9715741 | Leaf | 6.710 |
| SRR9715739 | Root | 0.314 |
| SRR9715742 | Root | 0.720 |
| SRR9715743 | Root | 0.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.902 |
| SRR8749028 | MeJA induced 9h | 1.723 |
| SRR8749029 | MeJA induced 9h | 1.986 |
| SRR8749030 | Uninduced | 1.675 |
| SRR8749031 | Uninduced | 0.839 |
| SRR8749032 | Uninduced | 1.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.894 |
| SRR8400027 | Control - Root | 5.089 |