Gene detail information of Glyur000123s00008430 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59350.1 | 1.00E-21 | |
| NR | AFK46332.1 | 2.24E-98 | unknown [Lotus japonicus] |
| trEMBL | tr|I3T1E0|I3T1E0_LOTJA | 8.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:AFK46332.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00123 | 170971 | 171861 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 38.770 |
| SRR1783600 | control | 39.159 |
| SRR1783602 | moderate drought stress | 39.439 |
| SRR1811619 | moderate drought stress | 35.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.068 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.295 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.677 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.838 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 77.572 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 77.367 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.433 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.811 |
| SRR2868004 | Drought Stress (root) | 8.859 |
| SRR2967015 | Control (root) | 11.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.855 |
| SRR9715740 | Leaf | 20.645 |
| SRR9715741 | Leaf | 16.877 |
| SRR9715739 | Root | 8.959 |
| SRR9715742 | Root | 27.515 |
| SRR9715743 | Root | 23.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.858 |
| SRR8749028 | MeJA induced 9h | 12.922 |
| SRR8749029 | MeJA induced 9h | 15.967 |
| SRR8749030 | Uninduced | 6.149 |
| SRR8749031 | Uninduced | 3.499 |
| SRR8749032 | Uninduced | 2.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.052 |
| SRR8400027 | Control - Root | 22.628 |