Gene detail information of Glyur000123s00008427 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77210.2 | 5.00E-63 | sugar transporter 14 |
| NR | KEH21344.1 | 1.58E-115 | sugar porter (SP) family MFS transporter [Medicago truncatula] |
| COG | YP_004959002.1 | 3.00E-20 | putative carbohydrate transporter [Streptomyces bingchenggensis BCW-1] |
| Swissprot | tr|Q8GW61|STP14_ARATH | 3.00E-80 | Sugar transport protein 14 |
| trEMBL | tr|A0A072TUZ6|A0A072TUZ6_MEDTR | 6.00E-116 | Sugar porter (SP) family MFS transporter {ECO:0000313|EMBL:KEH21344.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00123 | 142054 | 142901 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000123s00008427.1 | PF00083.19 | Sugar_tr | 13 | 166 | 8.50E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.892 |
| SRR1783600 | control | 3.001 |
| SRR1783602 | moderate drought stress | 2.310 |
| SRR1811619 | moderate drought stress | 2.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.613 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.685 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.378 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.817 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.128 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.156 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.905 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.498 |
| SRR2868004 | Drought Stress (root) | 23.134 |
| SRR2967015 | Control (root) | 31.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.826 |
| SRR9715740 | Leaf | 1.854 |
| SRR9715741 | Leaf | 3.642 |
| SRR9715739 | Root | 4.245 |
| SRR9715742 | Root | 3.422 |
| SRR9715743 | Root | 4.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.477 |
| SRR8749028 | MeJA induced 9h | 8.508 |
| SRR8749029 | MeJA induced 9h | 6.432 |
| SRR8749030 | Uninduced | 1.304 |
| SRR8749031 | Uninduced | 2.722 |
| SRR8749032 | Uninduced | 15.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.323 |
| SRR8400027 | Control - Root | 6.806 |