Gene detail information of Glyur000123s00008424 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH30153.1 | 1.95E-35 | hypothetical protein MTR_4g063885 [Medicago truncatula] |
| Swissprot | tr|Q9LZ60|SMR3_ARATH | 5.00E-06 | Cyclin-dependent protein kinase inhibitor SMR3 |
| trEMBL | tr|A0A072UM31|A0A072UM31_MEDTR | 7.00E-36 | Uncharacterized protein {ECO:0000313|EMBL:KEH30153.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00123 | 126534 | 127019 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.272 |
| SRR1783600 | control | 6.312 |
| SRR1783602 | moderate drought stress | 9.352 |
| SRR1811619 | moderate drought stress | 9.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.225 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.823 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.710 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.523 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.581 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.334 |
| SRR2868004 | Drought Stress (root) | 7.023 |
| SRR2967015 | Control (root) | 9.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.780 |
| SRR9715740 | Leaf | 1.508 |
| SRR9715741 | Leaf | 0.911 |
| SRR9715739 | Root | 1.250 |
| SRR9715742 | Root | 6.631 |
| SRR9715743 | Root | 9.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.652 |
| SRR8749028 | MeJA induced 9h | 0.060 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.568 |
| SRR8400027 | Control - Root | 11.931 |