Gene detail information of Glyur000123s00008422 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G46540.1 | 1.00E-66 | ENTH/VHS family protein |
| NR | XP_003537994.1 | 1.25E-169 | PREDICTED: epsin-3-like [Glycine max] |
| Swissprot | tr|Q67YI9|EPN2_ARATH | 7.00E-16 | Clathrin interactor EPSIN 2 |
| trEMBL | tr|I1LK28|I1LK28_SOYBN | 5.00E-170 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G14850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00123 | 112925 | 114618 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000123s00008422.1 | PF01417.15 | ENTH | 32 | 152 | 1.30E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.681 |
| SRR1783600 | control | 15.734 |
| SRR1783602 | moderate drought stress | 14.246 |
| SRR1811619 | moderate drought stress | 13.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.129 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.962 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.559 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.484 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.623 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.698 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.022 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.677 |
| SRR2868004 | Drought Stress (root) | 55.466 |
| SRR2967015 | Control (root) | 39.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 36.260 |
| SRR9715740 | Leaf | 29.812 |
| SRR9715741 | Leaf | 64.538 |
| SRR9715739 | Root | 2.156 |
| SRR9715742 | Root | 6.101 |
| SRR9715743 | Root | 5.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 100.168 |
| SRR8749028 | MeJA induced 9h | 117.673 |
| SRR8749029 | MeJA induced 9h | 167.664 |
| SRR8749030 | Uninduced | 161.814 |
| SRR8749031 | Uninduced | 148.415 |
| SRR8749032 | Uninduced | 129.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.438 |
| SRR8400027 | Control - Root | 23.509 |