Gene detail information of Glyur000123s00008411 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59400.1 | 5.00E-70 | |
| NR | XP_004505857.1 | 4.06E-148 | PREDICTED: PGR5-like protein 1B, chloroplastic-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|I1LQP9|I1LQP9_SOYBN | 7.00E-146 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G06710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00123 | 55027 | 57975 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.593 |
| SRR1783600 | control | 13.821 |
| SRR1783602 | moderate drought stress | 12.662 |
| SRR1811619 | moderate drought stress | 13.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.508 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.220 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.112 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.651 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.212 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.003 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.389 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.195 |
| SRR2868004 | Drought Stress (root) | 13.659 |
| SRR2967015 | Control (root) | 16.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.651 |
| SRR9715740 | Leaf | 55.478 |
| SRR9715741 | Leaf | 42.437 |
| SRR9715739 | Root | 4.339 |
| SRR9715742 | Root | 6.002 |
| SRR9715743 | Root | 7.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.831 |
| SRR8749028 | MeJA induced 9h | 9.970 |
| SRR8749029 | MeJA induced 9h | 12.205 |
| SRR8749030 | Uninduced | 10.615 |
| SRR8749031 | Uninduced | 8.974 |
| SRR8749032 | Uninduced | 10.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.309 |
| SRR8400027 | Control - Root | 13.909 |