Gene detail information of Glyur000123s00008407 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12560.1 | 1.00E-05 | TRF-like 9 |
| NR | XP_006592196.1 | 8.29E-09 | PREDICTED: telomere repeat-binding protein 5-like isoform X1 [Glycine max] |
| trEMBL | tr|I1LQP6|I1LQP6_SOYBN | 3.00E-09 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G06680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00123 | 37619 | 40565 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.899 |
| SRR1783600 | control | 6.438 |
| SRR1783602 | moderate drought stress | 9.034 |
| SRR1811619 | moderate drought stress | 9.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.311 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.182 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.428 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.832 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.665 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.896 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.649 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.781 |
| SRR2868004 | Drought Stress (root) | 7.599 |
| SRR2967015 | Control (root) | 9.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.940 |
| SRR9715740 | Leaf | 1.889 |
| SRR9715741 | Leaf | 0.819 |
| SRR9715739 | Root | 1.953 |
| SRR9715742 | Root | 2.640 |
| SRR9715743 | Root | 3.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.524 |
| SRR8749028 | MeJA induced 9h | 4.210 |
| SRR8749029 | MeJA induced 9h | 4.284 |
| SRR8749030 | Uninduced | 2.409 |
| SRR8749031 | Uninduced | 2.530 |
| SRR8749032 | Uninduced | 2.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.209 |
| SRR8400027 | Control - Root | 15.375 |