Gene detail information of Glyur000123s00008406.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G07530.1 | 0 | SCARECROW-like 14 |
| NR | XP_004505854.1 | 0 | PREDICTED: scarecrow-like protein 14-like [Cicer arietinum] |
| Swissprot | tr|Q9XE58|SCL14_ARATH | 0 | Scarecrow-like protein 14 |
| trEMBL | tr|K7LPN1|K7LPN1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G14750.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00123 | 33059 | 36361 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRAS |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000123s00008406.1 | PF03514.9 | GRAS | 367 | 737 | 2.00E-115 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.700 |
| SRR1783600 | control | 10.743 |
| SRR1783602 | moderate drought stress | 14.899 |
| SRR1811619 | moderate drought stress | 14.801 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.618 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.441 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.129 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.672 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.581 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.296 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.693 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.494 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.761 |
| SRR2868004 | Drought Stress (root) | 8.480 |
| SRR2967015 | Control (root) | 10.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.367 |
| SRR9715740 | Leaf | 15.101 |
| SRR9715741 | Leaf | 12.150 |
| SRR9715739 | Root | 11.684 |
| SRR9715742 | Root | 17.227 |
| SRR9715743 | Root | 15.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.635 |
| SRR8749028 | MeJA induced 9h | 13.419 |
| SRR8749029 | MeJA induced 9h | 6.412 |
| SRR8749030 | Uninduced | 4.706 |
| SRR8749031 | Uninduced | 2.939 |
| SRR8749032 | Uninduced | 4.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.236 |
| SRR8400027 | Control - Root | 18.345 |