Gene detail information of Glyur000123s00008404 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G59460.1 | 3.00E-28 | scarecrow-like transcription factor 11 (SCL11) |
| NR | KHN33371.1 | 3.11E-84 | hypothetical protein glysoja_005413 [Glycine soja] |
| trEMBL | tr|I1MDD8|I1MDD8_SOYBN | 1.00E-84 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G04150.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00123 | 17093 | 19324 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000123s00008404.1 | PF10175.4 | MPP6 | 6 | 84 | 4.00E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.268 |
| SRR1783600 | control | 2.161 |
| SRR1783602 | moderate drought stress | 5.083 |
| SRR1811619 | moderate drought stress | 4.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.693 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.526 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.140 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.804 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.902 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.200 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.670 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.586 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.041 |
| SRR2868004 | Drought Stress (root) | 10.146 |
| SRR2967015 | Control (root) | 10.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.167 |
| SRR9715740 | Leaf | 10.144 |
| SRR9715741 | Leaf | 9.499 |
| SRR9715739 | Root | 1.589 |
| SRR9715742 | Root | 3.784 |
| SRR9715743 | Root | 3.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.920 |
| SRR8749028 | MeJA induced 9h | 15.173 |
| SRR8749029 | MeJA induced 9h | 25.312 |
| SRR8749030 | Uninduced | 12.756 |
| SRR8749031 | Uninduced | 17.464 |
| SRR8749032 | Uninduced | 18.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.171 |
| SRR8400027 | Control - Root | 8.868 |