Gene detail information of Glyur000122s00010201 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21390.1 | 4.00E-100 | S-locus lectin protein kinase family protein |
| NR | KHN19084.1 | 0 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 [Glycine soja] |
| Swissprot | tr|O81906|B120_ARATH | 8.00E-121 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 (Precursor) |
| trEMBL | tr|K7M1R6|K7M1R6_SOYBN | 0 | Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00122 | 173623 | 177371 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000122s00010201.1 | PF01453.19 | B_lectin | 86 | 197 | 9.50E-27 |
| Glyur000122s00010201.1 | PF00954.15 | S_locus_glycop | 225 | 340 | 2.70E-20 |
| Glyur000122s00010201.1 | PF08276.6 | PAN_2 | 377 | 431 | 3.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.630 |
| SRR1783600 | control | 5.768 |
| SRR1783602 | moderate drought stress | 6.580 |
| SRR1811619 | moderate drought stress | 6.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.758 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.863 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.921 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.579 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.482 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.004 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.757 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.002 |
| SRR2868004 | Drought Stress (root) | 17.782 |
| SRR2967015 | Control (root) | 21.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.817 |
| SRR9715740 | Leaf | 19.963 |
| SRR9715741 | Leaf | 36.361 |
| SRR9715739 | Root | 18.461 |
| SRR9715742 | Root | 80.466 |
| SRR9715743 | Root | 68.565 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.905 |
| SRR8749028 | MeJA induced 9h | 95.196 |
| SRR8749029 | MeJA induced 9h | 36.459 |
| SRR8749030 | Uninduced | 43.687 |
| SRR8749031 | Uninduced | 13.513 |
| SRR8749032 | Uninduced | 17.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.405 |
| SRR8400027 | Control - Root | 34.449 |