Gene detail information of Glyur000122s00010194 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61660.1 | 1.00E-52 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| NR | XP_006597380.1 | 0 | PREDICTED: transcription factor bHLH112-like isoform X1 [Glycine max] |
| Swissprot | tr|Q94JL3|BH112_ARATH | 1.00E-67 | Transcription factor bHLH112 |
| trEMBL | tr|K7M9Y5|K7M9Y5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G07010.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00122 | 99992 | 103500 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.185 |
| SRR1783600 | control | 3.251 |
| SRR1783602 | moderate drought stress | 3.457 |
| SRR1811619 | moderate drought stress | 3.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.616 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.230 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.179 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.884 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.432 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.823 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.484 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.623 |
| SRR2868004 | Drought Stress (root) | 33.455 |
| SRR2967015 | Control (root) | 33.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 49.369 |
| SRR9715740 | Leaf | 53.270 |
| SRR9715741 | Leaf | 75.220 |
| SRR9715739 | Root | 3.220 |
| SRR9715742 | Root | 52.996 |
| SRR9715743 | Root | 42.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.164 |
| SRR8749028 | MeJA induced 9h | 14.128 |
| SRR8749029 | MeJA induced 9h | 4.061 |
| SRR8749030 | Uninduced | 0.535 |
| SRR8749031 | Uninduced | 0.436 |
| SRR8749032 | Uninduced | 0.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.113 |
| SRR8400027 | Control - Root | 32.195 |