Gene detail information of Glyur000122s00010191 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G11430.1 | 3.00E-76 | plastid developmental protein DAG, putative |
| NR | XP_003593397.1 | 6.38E-131 | DAG protein [Medicago truncatula] |
| Swissprot | tr|Q38732|DAG_ANTMA | 6.00E-96 | DAG protein, chloroplastic (Precursor) |
| trEMBL | tr|G7IK38|G7IK38_MEDTR | 2.00E-131 | Plastid developmental protein DAG {ECO:0000313|EMBL:AES63648.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00122 | 86513 | 89306 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.331 |
| SRR1783600 | control | 28.415 |
| SRR1783602 | moderate drought stress | 27.466 |
| SRR1811619 | moderate drought stress | 27.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.737 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 35.922 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.563 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.396 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.469 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.408 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 96.629 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 95.758 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.177 |
| SRR2868004 | Drought Stress (root) | 16.385 |
| SRR2967015 | Control (root) | 15.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 67.215 |
| SRR9715740 | Leaf | 113.002 |
| SRR9715741 | Leaf | 61.142 |
| SRR9715739 | Root | 19.219 |
| SRR9715742 | Root | 23.745 |
| SRR9715743 | Root | 22.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.397 |
| SRR8749028 | MeJA induced 9h | 16.799 |
| SRR8749029 | MeJA induced 9h | 12.077 |
| SRR8749030 | Uninduced | 7.404 |
| SRR8749031 | Uninduced | 3.393 |
| SRR8749032 | Uninduced | 3.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.986 |
| SRR8400027 | Control - Root | 26.293 |