Gene detail information of Glyur000122s00010180 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61680.1 | 5.00E-107 | terpene synthase 14 |
| NR | KEH34358.1 | 0 | (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase [Medicago truncatula] |
| Swissprot | tr|P0CV94|NES1_FRAAN | 3.00E-177 | (3S,6E)-nerolidol synthase 1 |
| trEMBL | tr|A0A072UZ48|A0A072UZ48_MEDTR | 0 | (3S)-linalool/(E)-nerolidol/(E,E)-geranyl linalool synthase {ECO:0000313|EMBL:KEH34358.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00122 | 55639 | 59225 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K15086 | TPS14 | EC:4.2.3.25 | Monoterpenoid biosynthesis | map00902 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000122s00010180.1 | PF01397.16 | Terpene_synth | 25 | 169 | 5.30E-34 |
| Glyur000122s00010180.1 | PF03936.11 | Terpene_synth_C | 211 | 479 | 1.30E-60 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.067 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.065 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.967 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.014 |
| SRR2967015 | Control (root) | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.135 |
| SRR9715740 | Leaf | 3.704 |
| SRR9715741 | Leaf | 11.357 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.017 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.001 |