Gene detail information of Glyur000122s00010178 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54630.1 | 5.00E-76 | zinc finger protein-related |
| NR | KHN33614.1 | 0 | hypothetical protein glysoja_005656 [Glycine soja] |
| trEMBL | tr|I1ME64|I1ME64_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G06920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00122 | 46228 | 47827 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.813 |
| SRR1783600 | control | 2.758 |
| SRR1783602 | moderate drought stress | 2.032 |
| SRR1811619 | moderate drought stress | 1.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.091 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.090 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.315 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 25.884 |
| SRR2868004 | Drought Stress (root) | 50.216 |
| SRR2967015 | Control (root) | 33.931 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.084 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.335 |
| SRR9715739 | Root | 0.448 |
| SRR9715742 | Root | 0.738 |
| SRR9715743 | Root | 0.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.017 |
| SRR8749028 | MeJA induced 9h | 0.342 |
| SRR8749029 | MeJA induced 9h | 0.136 |
| SRR8749030 | Uninduced | 0.367 |
| SRR8749031 | Uninduced | 0.879 |
| SRR8749032 | Uninduced | 0.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.266 |
| SRR8400027 | Control - Root | 11.657 |