Gene detail information of Glyur000122s00010177 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21310.1 | 1.00E-57 | Protein of unknown function (DUF1218) |
| NR | XP_004485666.1 | 4.97E-104 | PREDICTED: uncharacterized protein LOC101513518 [Cicer arietinum] |
| trEMBL | tr|V7BQL8|V7BQL8_PHAVU | 4.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:ESW20287.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00122 | 42927 | 44268 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000122s00010177.1 | PF06749.7 | DUF1218 | 57 | 147 | 9.80E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.723 |
| SRR1783600 | control | 3.905 |
| SRR1783602 | moderate drought stress | 1.882 |
| SRR1811619 | moderate drought stress | 1.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.960 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.234 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.150 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.910 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.477 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.216 |
| SRR2868004 | Drought Stress (root) | 6.072 |
| SRR2967015 | Control (root) | 5.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.460 |
| SRR9715740 | Leaf | 1.078 |
| SRR9715741 | Leaf | 0.914 |
| SRR9715739 | Root | 1.682 |
| SRR9715742 | Root | 4.766 |
| SRR9715743 | Root | 4.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.226 |
| SRR8400027 | Control - Root | 2.284 |