Gene detail information of Glyur000122s00010174 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G11510.1 | 8.00E-18 | DNA-binding storekeeper protein-related transcriptional regulator |
| NR | XP_003541767.1 | 1.76E-90 | PREDICTED: mediator-associated protein 1-like [Glycine max] |
| Swissprot | tr|Q9SB42|MDA1_ARATH | 3.00E-15 | Mediator-associated protein 1 |
| trEMBL | tr|K7M1T5|K7M1T5_SOYBN | 7.00E-91 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G32440.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00122 | 36483 | 37913 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GeBP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000122s00010174.1 | PF04504.9 | DUF573 | 209 | 303 | 1.50E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 108.223 |
| SRR1783600 | control | 112.032 |
| SRR1783602 | moderate drought stress | 125.908 |
| SRR1811619 | moderate drought stress | 125.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 129.621 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 128.381 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 98.784 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 97.027 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 91.004 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 91.829 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 37.583 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 38.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 98.336 |
| SRR2868004 | Drought Stress (root) | 76.874 |
| SRR2967015 | Control (root) | 84.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.783 |
| SRR9715740 | Leaf | 39.122 |
| SRR9715741 | Leaf | 40.019 |
| SRR9715739 | Root | 102.475 |
| SRR9715742 | Root | 87.882 |
| SRR9715743 | Root | 87.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 83.848 |
| SRR8749028 | MeJA induced 9h | 47.571 |
| SRR8749029 | MeJA induced 9h | 44.710 |
| SRR8749030 | Uninduced | 10.912 |
| SRR8749031 | Uninduced | 2.161 |
| SRR8749032 | Uninduced | 5.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 74.192 |
| SRR8400027 | Control - Root | 71.884 |