Gene detail

Gene detail information of Glyur000122s00010173

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT4G21270.1	kinesin 1
NR	XP_004485663.1	PREDICTED: kinesin-1-like [Cicer arietinum]
Swissprot	tr\|Q07970\|ATK1_ARATH	Kinesin-1
trEMBL	tr\|I1KLA2\|I1KLA2_SOYBN	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000122s00010173.1
CTTCCGAACGGGCGAACACTTCACACAACACAACACACACAACTGCAAACCCTAACATCGTTCCCAATTTCTGCAAAGCCTCACTCACATGGCTTCCCGGAACCAGAACAGGCCACCGCGCAGCCCCTCCAACAAAAAGGGAGGTGGTGAGGAAGTTCCCTCAGACAAGCGACGAAGGACGGGAGCAGAAAGAATGGAGCGACAGGGCCGAGCCAGGGCTCCATTTGGTGCACTCAACACCAACAAAGCAGAAGCCAACGATGCTGGTGGCGCCGAGGGATCCGAATGCAGCACTGTTGATTTCACCAAAGAGGACGTAGAGGCATTGCTGAATGAGAAGATGAAAAAGGGGAATCCCTTTGATAATAAGAAAAAGATGGACCAGATGGCAGATCTCATTAAGCGACTTAAACTTTGCCTTCAATGGTTTAAGAGAGTTGAAGAAGGCTACATCCAAGAAAAAGAAAAGCTTCAGACTGATCTAGAATCTTCTGAGAAGAAATGTATTGATACTGAGAATGAGATGAAACTGAAGATGGCGGAATTGAATGAGGTTATATCNAATTTGAGGATGACAATTTCCTCTTTGGAAGAGAGGATTACAAAGGAAGAATCAGATAAATTGGAAGCTATTGATTGTTATAGAAAAGAAAAAGAAGCCAGAAATGCAGCTGAGGAGATGCAAGCTTCTCTTTCAACTGAACTTGAGAAAGTTCGTGTTGAGAAATCAACTGCTGAGCGGAAGGCCATTGCAAATGATGACCTGTACAAGCGATCACAAGAGTATAATATGAGTCTGCAGCAGTACAATAGTCGTCTTCAGTTAGATCTTGAAAATACAAAAACGGCACTTACAGATCTGGAAAAAGAGAAAGCAACTATTGTTGAAAACCAGAGCAAAGTAAGAGGCCACAATGATGCATTGCAAGATCAGTTGGCATTTCTTAAAGCTTCAAAAGATGAGGTAACAAAGCAGAAAGAAATGTTAGCAAATGAACTCAAATGCCTTCGGGAAGAATTAAAACAAATTAGAGATGATCGTGATTGCCAACTGCTACAAGTACAGACTTTAACTGACGAAGTAGCAAAATACAATAAAAAAACTGGGGAATCATGTGCACNGTTGGAGGATTTGATGACTAAAACAACTACTCTCGAGGAGACATGTAAGTCTCAAAGGGAGGAAATAAGCATGTTGCAGCAGCAGTTAATTGCTGAAAAGGAGAAGTCAAAGATGGCTGATTTATCTGCTTCAGAAACAAGAACAGTGTTTGAAGAACTACATGAGCGACTAGCAGATCAGAAAAGAGTTATACATGAACTAGAACGCCAAGTAATTGGAGGAGAGGAGTTAAGGAAAAAACTGCACAACACTATCCTGGAGTTAAAAGGAAATATTCGCGTGTTCTGCCGTGTCCGGCCTTTGCTGCCAGATGATGGTCCTTCAGCAGACATGGTATTTAATCACGAGGCTTCTCAGGAAGAAGTTTTCACAGAGATATCACAGCTGGTACAAAGCGCGCTTGATGGGTACAAGGTTTGTATCTTTGCTTATGGACAGACAGGTTCAGGCAAAACCTACACAATGATGGGTAGGCCTGATGCCCCAGAGCTGAAAGGATTGATACCACGTTCTCTAGAACAGATATTCCAGATTAGTCAGTCCCTGAAAGATCAGGGGTGGAAGTACAAAATGCAGGCNTCAATACTGGAAATATACAATGAGACCATCAGGGATTTGTTATCACCGAATCGGTCGAGTGGTATTGATGTAACACGAACGGATAATGGTGCTCCTGGAAAGCAGTACACTATCAAACACGATGCCAATGGAAACACATACGTTTCTGACCTGACTATTGTGGATGTTTGCAGTGTAAATGAGATTTCCTCCCTCCTGCAACAGGCTGCGCAAAGCAGGTCAGTAGGAAGAACACAGATGAATGAACAGTCATCACGAAGTCACTTTGTCTTTACTTTGCGTATATGTGGTTTTAATGAGAAGACTGAACAACAGGTGCAAGGTGTGTTAAACCTGATTGATCTGGCTGGAAGTGAAAGGCTGTCTAGAAGTGGAGCAACTGGGGACCGTTTGAAGGAAACTCAGGCTATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATTTTTGCTTTGGCAAAGAAAGAGGAGCATGTCCCATTTAGGAATTCAAAACTGACATACCTTCTCCAGCCATGTCTTGGTGGAGATTCCAAAACTTTGATGTTTGTCAACATCTCACCTGACCCATCTTCAACAGGAGAGTCACTTTGCTCTCTTCGTTTTGCTGCCAGAGTCAATGCTTGTGAGATTGGTATTCCTCGGCGTCAGACATCAACACGATCCTTTGATTCNCGTTTGAGTTATGGCTAAAAAGAAAGGCCTGCTAGACAGTGGCGCGTCTCACATTATCCATAACCAAAATTAACTGTTATTTGTAATGCTTCCGCAGGGATAAAATGCCGATCAATTTTAGTCTTTGATGAATGAATGTAACTGTGTTAACTTTCTAGAGAATTGGGCTTGTATAAATCGATTGTAGAGGCTTGGCTATAGCCTCAAAATGGTGTTAGTGATGATTTGTACAAATCATTAAACTGTGTCATGATAATATTCGT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00122	26289	32731	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000122s00010173.1	PF00225.18	Kinesin	455	744	9.50E-102

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.459
SRR1783600	control	5.405
SRR1783602	moderate drought stress	3.520
SRR1811619	moderate drought stress	3.491

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.441
DRR006520	Root Summer glycyrrhizin high producing strain	9.388
DRR006521	Root Winter glycyrrhizin high producing strain	0.640
DRR006522	Root Winter glycyrrhizin high producing strain	0.563
DRR006523	Root Summer glycyrrhizin low producing strain	3.087
DRR006524	Root Summer glycyrrhizin low producing strain	3.647
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.438
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.319

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	37.910
SRR2868004	Drought Stress (root)	15.198
SRR2967015	Control (root)	18.463

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	6.272
SRR9715740	Leaf	0.370
SRR9715741	Leaf	1.652
SRR9715739	Root	1.944
SRR9715742	Root	2.575
SRR9715743	Root	3.660

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	36.634
SRR8749028	MeJA induced 9h	35.243
SRR8749029	MeJA induced 9h	19.527
SRR8749030	Uninduced	1.678
SRR8749031	Uninduced	0.938
SRR8749032	Uninduced	2.067

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	30.202
SRR8400027	Control - Root	22.077