Gene detail information of Glyur000122s00010167 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G05200.1 | 1.00E-22 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25 |
| NR | XP_003543106.1 | 2.89E-157 | PREDICTED: cysteine-rich receptor-like protein kinase 6-like [Glycine max] |
| Swissprot | tr|Q9M0X5|CRK25_ARATH | 2.00E-24 | Cysteine-rich receptor-like protein kinase 25 (Precursor) |
| trEMBL | tr|I1M2H5|I1M2H5_SOYBN | 1.00E-157 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G32490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00122 | 10009 | 11191 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000122s00010167.1 | PF01657.12 | Stress-antifung | 30 | 129 | 2.70E-22 |
| Glyur000122s00010167.1 | PF01657.12 | Stress-antifung | 158 | 240 | 6.20E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.290 |
| SRR1811619 | moderate drought stress | 0.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.667 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.623 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.520 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.531 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.111 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.780 |
| SRR2868004 | Drought Stress (root) | 3.936 |
| SRR2967015 | Control (root) | 13.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.080 |
| SRR9715740 | Leaf | 0.003 |
| SRR9715741 | Leaf | 0.157 |
| SRR9715739 | Root | 0.060 |
| SRR9715742 | Root | 0.467 |
| SRR9715743 | Root | 0.426 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.246 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.453 |
| SRR8749032 | Uninduced | 0.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.204 |
| SRR8400027 | Control - Root | 1.985 |