Gene detail information of Glyur000121s00009737 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00950.1 | 4.00E-08 | Protein of unknown function (DUF688) |
| NR | XP_004494834.1 | 5.06E-71 | PREDICTED: uncharacterized protein At4g00950-like [Cicer arietinum] |
| Swissprot | tr|Q9M160|Y4095_ARATH | 2.00E-16 | Uncharacterized protein At4g00950 |
| trEMBL | tr|A0A072U4Q9|A0A072U4Q9_MEDTR | 4.00E-66 | DUF688 family protein {ECO:0000313|EMBL:KEH24687.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 310766 | 313506 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009737.1 | PF05097.7 | DUF688 | 25 | 78 | 2.00E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 40.040 |
| SRR1783600 | control | 40.275 |
| SRR1783602 | moderate drought stress | 66.072 |
| SRR1811619 | moderate drought stress | 65.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.778 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.052 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.087 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.534 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.286 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.521 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.064 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.314 |
| SRR2868004 | Drought Stress (root) | 19.920 |
| SRR2967015 | Control (root) | 23.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.210 |
| SRR9715740 | Leaf | 15.264 |
| SRR9715741 | Leaf | 12.043 |
| SRR9715739 | Root | 53.566 |
| SRR9715742 | Root | 27.885 |
| SRR9715743 | Root | 30.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.665 |
| SRR8749028 | MeJA induced 9h | 13.881 |
| SRR8749029 | MeJA induced 9h | 9.946 |
| SRR8749030 | Uninduced | 6.873 |
| SRR8749031 | Uninduced | 2.761 |
| SRR8749032 | Uninduced | 3.908 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 70.560 |
| SRR8400027 | Control - Root | 73.945 |