Gene detail information of Glyur000121s00009733 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49250.1 | 2.00E-78 | defective in meristem silencing 3 |
| NR | XP_004494831.1 | 0 | PREDICTED: uncharacterized protein LOC101513030 [Cicer arietinum] |
| Swissprot | tr|Q94A79|DMS3_ARATH | 6.00E-105 | Protein DEFECTIVE IN MERISTEM SILENCING 3 |
| trEMBL | tr|A0A072UFX0|A0A072UFX0_MEDTR | 0 | Defective in meristem silencing protein {ECO:0000313|EMBL:KEH24680.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 285578 | 289390 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.088 |
| SRR1783600 | control | 7.132 |
| SRR1783602 | moderate drought stress | 9.113 |
| SRR1811619 | moderate drought stress | 8.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.921 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.983 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.250 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.174 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.239 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.153 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.021 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.193 |
| SRR2868004 | Drought Stress (root) | 26.683 |
| SRR2967015 | Control (root) | 28.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 46.331 |
| SRR9715740 | Leaf | 36.964 |
| SRR9715741 | Leaf | 32.083 |
| SRR9715739 | Root | 8.527 |
| SRR9715742 | Root | 11.414 |
| SRR9715743 | Root | 11.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.031 |
| SRR8749028 | MeJA induced 9h | 10.487 |
| SRR8749029 | MeJA induced 9h | 11.066 |
| SRR8749030 | Uninduced | 3.079 |
| SRR8749031 | Uninduced | 1.177 |
| SRR8749032 | Uninduced | 2.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.770 |
| SRR8400027 | Control - Root | 19.773 |