Gene detail information of Glyur000121s00009732.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10920.2 | 1.00E-31 | transcriptional coactivator p15 (PC4) family protein (KELP) |
| NR | XP_004494830.1 | 4.50E-88 | PREDICTED: uncharacterized protein LOC101512708 [Cicer arietinum] |
| Swissprot | tr|O65155|KELP_ARATH | 2.00E-37 | RNA polymerase II transcriptional coactivator KELP |
| trEMBL | tr|K7N0C0|K7N0C0_SOYBN | 3.00E-84 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G44551.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 281017 | 284716 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | Coactivator p15 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009732.1 | PF08766.6 | DEK_C | 8 | 60 | 3.50E-11 |
| Glyur000121s00009732.1 | PF02229.11 | PC4 | 129 | 183 | 2.80E-20 |
| Glyur000121s00009732.1 | PF14227.1 | UBN2_2 | 251 | 321 | 7.10E-09 |
| Glyur000121s00009732.1 | PF00098.18 | zf-CCHC | 369 | 384 | 3.50E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.431 |
| SRR1783600 | control | 4.182 |
| SRR1783602 | moderate drought stress | 5.584 |
| SRR1811619 | moderate drought stress | 5.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.736 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.428 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.406 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.151 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.428 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.743 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.845 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.309 |
| SRR2868004 | Drought Stress (root) | 9.345 |
| SRR2967015 | Control (root) | 11.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.404 |
| SRR9715740 | Leaf | 10.688 |
| SRR9715741 | Leaf | 11.321 |
| SRR9715739 | Root | 0.956 |
| SRR9715742 | Root | 4.219 |
| SRR9715743 | Root | 4.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.581 |
| SRR8749028 | MeJA induced 9h | 7.737 |
| SRR8749029 | MeJA induced 9h | 8.456 |
| SRR8749030 | Uninduced | 5.436 |
| SRR8749031 | Uninduced | 5.142 |
| SRR8749032 | Uninduced | 4.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.870 |
| SRR8400027 | Control - Root | 8.284 |