Gene detail information of Glyur000121s00009730 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_002994711.1 | 8.76E-11 | hypothetical protein SELMODRAFT_432611, partial [Selaginella moellendorffii] |
| trEMBL | tr|D8TGJ2|D8TGJ2_SELML | 3.00E-11 | Putative uncharacterized protein {ECO:0000313|EMBL:EFJ04226.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 266430 | 267391 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 131.695 |
| SRR1783600 | control | 130.977 |
| SRR1783602 | moderate drought stress | 93.674 |
| SRR1811619 | moderate drought stress | 93.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 152.288 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 148.272 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.390 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.719 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 107.314 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 105.270 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 25.284 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.995 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.848 |
| SRR2868004 | Drought Stress (root) | 9.377 |
| SRR2967015 | Control (root) | 2.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.964 |
| SRR9715740 | Leaf | 2.938 |
| SRR9715741 | Leaf | 0.978 |
| SRR9715739 | Root | 1.599 |
| SRR9715742 | Root | 2.277 |
| SRR9715743 | Root | 10.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.849 |
| SRR8749028 | MeJA induced 9h | 5.552 |
| SRR8749029 | MeJA induced 9h | 5.611 |
| SRR8749030 | Uninduced | 1.370 |
| SRR8749031 | Uninduced | 0.982 |
| SRR8749032 | Uninduced | 5.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.493 |
| SRR8400027 | Control - Root | 1.015 |