Gene detail

Gene detail information of Glyur000121s00009729

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G01300.1	3.00E-174	Eukaryotic aspartyl protease family protein
NR	XP_004494825.1	0	PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Cicer arietinum]
Swissprot	tr\|Q9LS40\|ASPG1_ARATH	4.00E-130	Protein ASPARTIC PROTEASE IN GUARD CELL 1 (Precursor)
trEMBL	tr\|V7BRW0\|V7BRW0_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW19311.1}

Sequence

Transcript Sequence

>Glyur000121s00009729.1
ATGGAAGAAGTGAAGAAAGCCAAACACGGCCTTCTCTTCCTATTATTGGCAGTCTCCTTCTCCCTCTCCGCCGCCNCGACAGACCCATTACAGTTCCAAACCCAAACTCTGGTTGTCCACTCTCTCCCCCATCCAGCCACCCTCTCATGGCCCGAATCAGAATCCNTCTCCGAGCCCGAATCCGGATCCGACCCGGAGCCTCTATCGCTTCAAATGCACCACATAGACGCACTCTCCCTCAACAAAACCCCAGAACAGCTCTTCCATCTCAGGCTCCAGAGAGATGCAGCAAGAGTCGAAGCCTTCTTCGNCTCCGCAGCAGCTCTGAACCGATCCCACGCGCGCAGATCCGGGCCGGGTTTCAGCAGCTCCATCGTATCGGGTCTGTCACAGGGCAGCGGCGAGTACTTCACGCGCATAGGCGTGGGCACGCCGGCGAGGTACGTGTACATGGTTCTCGACACCGGAAGCGACGTCGTTTGGCTCCAGTGCGCTCCATGCCGCAAGTGCTACTCCCAGGCCGACCCAGTTTTCGACCCGACCAAATCTCGTACCTTCGCCGGAATCCCCTGCGGCGCACCTCTCTGCCGGAAACTGGACTCCTCCGGCTGCAACAGGAAGAAGGTTTGCCAGTACCAGGTTTCCTACGGCGACGGCTCGTTCACGTTTGGTGATTTCTCCACCGAAACGCTGACGTTTCGAAGGACGCGTGTTGCGCGNGTGGCACTCGGATGTGGCCACGACAACGAGGGACTCTTCGTCGGTGCTTCCGGTTTGTTGGGTCTGGGTCGCGGGAGATTGTCGTTTCCGGTCCAAACCGGTCGCCGGTTCAACCAGAAGTTCTCTTATTGCCTCGTGGACCGGTCCGCTTCCGCAAGGCCCTCGTCCGTTGTTTTTGGCGACTCGGCNGTTTCCCGAACCGCCCGGTTCACTCCGCTCCTCAAAAACCCTAAGCTCGACACCTTCTATTACGTGGAGCTTCTTGGGATCAGCGTCGGTGGCGCTCCCGTTCGTGGCGTCTCCGCTTCTCTCTTCCGGCTCGATCCCACCGGGAACGGCGGCGTGATNATCGACTCGGGCACTTCCGTGACCCGATTGACCCGACCCGCATACATCGCGCTGAGGGACGCTTTCCGTGCCGGGGCGTCGCGCCTGAAGCGNGCGCCGGAGTTCTCGCTGTTCGACACGTGCTTCGACCTGTCCGGGCTGACGGAGGTGAAGGTTCCCACGGTGGTGCTGCACTTCCGGGGTGCTGACGTGTCGCTTCCGGCGACGAATTACTTGATCCCGGTGGATAACAGCGGGAGCTTCTGCTTTGCCTTCGCCGGAACGATGAGCGGCTTGTCCATTATCGGAAACATCCAGCAGCAAGGGTTTCGTGTCGTGTATGATCTTGCGGCTTCACGGGTCGGGTTTGCCCCGAGAGGGTGCGCGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00121	266342	267778	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004190 aspartic-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000121s00009729.1	PF14543.1	TAXi_N	136	301	5.10E-45
Glyur000121s00009729.1	PF14541.1	TAXi_C	322	474	5.60E-40

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	405.314
SRR1783600	control	402.436
SRR1783602	moderate drought stress	215.409
SRR1811619	moderate drought stress	220.472

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	271.157
DRR006520	Root Summer glycyrrhizin high producing strain	265.891
DRR006521	Root Winter glycyrrhizin high producing strain	40.831
DRR006522	Root Winter glycyrrhizin high producing strain	38.791
DRR006523	Root Summer glycyrrhizin low producing strain	173.617
DRR006524	Root Summer glycyrrhizin low producing strain	172.390
DRR006525	Leaf Summer glycyrrhizin high producing strain	43.753
DRR006526	Leaf Summer glycyrrhizin high producing strain	43.632

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	161.339
SRR2868004	Drought Stress (root)	88.449
SRR2967015	Control (root)	93.918

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	40.410
SRR9715740	Leaf	12.501
SRR9715741	Leaf	18.218
SRR9715739	Root	580.211
SRR9715742	Root	327.277
SRR9715743	Root	329.643

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	47.087
SRR8749028	MeJA induced 9h	23.384
SRR8749029	MeJA induced 9h	24.531
SRR8749030	Uninduced	5.674
SRR8749031	Uninduced	1.506
SRR8749032	Uninduced	11.588

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	169.838
SRR8400027	Control - Root	236.285