Gene detail information of Glyur000121s00009727 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61800.1 | 3.00E-156 | |
| NR | XP_004494824.1 | 0 | PREDICTED: UV-stimulated scaffold protein A homolog [Cicer arietinum] |
| Swissprot | tr|Q9M358|UVSSA_ARATH | 0 | UV-stimulated scaffold protein A homolog |
| trEMBL | tr|I1NCM3|I1NCM3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G44530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 259536 | 262253 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009727.1 | PF09740.4 | DUF2043 | 410 | 514 | 6.80E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.586 |
| SRR1783600 | control | 2.597 |
| SRR1783602 | moderate drought stress | 4.574 |
| SRR1811619 | moderate drought stress | 4.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.639 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.558 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.191 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.947 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.581 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.159 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.966 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.960 |
| SRR2868004 | Drought Stress (root) | 16.921 |
| SRR2967015 | Control (root) | 27.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.834 |
| SRR9715740 | Leaf | 33.578 |
| SRR9715741 | Leaf | 22.358 |
| SRR9715739 | Root | 1.716 |
| SRR9715742 | Root | 7.916 |
| SRR9715743 | Root | 8.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 30.378 |
| SRR8749028 | MeJA induced 9h | 60.808 |
| SRR8749029 | MeJA induced 9h | 46.375 |
| SRR8749030 | Uninduced | 39.837 |
| SRR8749031 | Uninduced | 83.993 |
| SRR8749032 | Uninduced | 62.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.456 |
| SRR8400027 | Control - Root | 12.661 |