Gene detail information of Glyur000121s00009725 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61770.1 | 2.00E-56 | Acid phosphatase/vanadium-dependent haloperoxidase-related protein |
| NR | KEH24632.1 | 1.34E-81 | acid phosphatase/vanadium-dependent haloperoxidase [Medicago truncatula] |
| COG | YP_001180627.1 | 5.00E-23 | acid phosphatase/vanadium-dependent haloperoxidase-like protein [Caldicellulosiruptor saccharolyticus DSM 8903] |
| trEMBL | tr|A0A072U4K7|A0A072U4K7_MEDTR | 5.00E-82 | Acid phosphatase/vanadium-dependent haloperoxidase {ECO:0000313|EMBL:KEH24632.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 247425 | 250367 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009725.1 | PF02681.9 | DUF212 | 136 | 229 | 2.60E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.407 |
| SRR1783600 | control | 3.358 |
| SRR1783602 | moderate drought stress | 3.154 |
| SRR1811619 | moderate drought stress | 3.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.848 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.831 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.554 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.561 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.214 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.276 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.602 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.219 |
| SRR2868004 | Drought Stress (root) | 6.506 |
| SRR2967015 | Control (root) | 6.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.631 |
| SRR9715740 | Leaf | 4.412 |
| SRR9715741 | Leaf | 2.374 |
| SRR9715739 | Root | 1.736 |
| SRR9715742 | Root | 2.046 |
| SRR9715743 | Root | 2.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.509 |
| SRR8749028 | MeJA induced 9h | 2.249 |
| SRR8749029 | MeJA induced 9h | 1.066 |
| SRR8749030 | Uninduced | 0.555 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.901 |
| SRR8400027 | Control - Root | 13.196 |