Gene detail information of Glyur000121s00009724 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60780.1 | 6.00E-13 | Protein of unknown function (DUF1442) |
| NR | XP_007147312.1 | 7.75E-115 | hypothetical protein PHAVU_006G113200g [Phaseolus vulgaris] |
| trEMBL | tr|V7BRV3|V7BRV3_PHAVU | 3.00E-115 | Uncharacterized protein {ECO:0000313|EMBL:ESW19306.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 241955 | 245236 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009724.1 | PF07279.6 | DUF1442 | 33 | 229 | 1.20E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.276 |
| SRR1783600 | control | 0.179 |
| SRR1783602 | moderate drought stress | 0.155 |
| SRR1811619 | moderate drought stress | 0.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.717 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.780 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.149 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.253 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.370 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.055 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.715 |
| SRR9715740 | Leaf | 0.207 |
| SRR9715741 | Leaf | 0.429 |
| SRR9715739 | Root | 1.192 |
| SRR9715742 | Root | 5.356 |
| SRR9715743 | Root | 6.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.245 |
| SRR8749028 | MeJA induced 9h | 0.534 |
| SRR8749029 | MeJA induced 9h | 0.704 |
| SRR8749030 | Uninduced | 0.344 |
| SRR8749031 | Uninduced | 0.048 |
| SRR8749032 | Uninduced | 0.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.612 |
| SRR8400027 | Control - Root | 0.634 |