Gene detail information of Glyur000121s00009714 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61680.1 | 2.00E-162 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004494811.1 | 0 | PREDICTED: uncharacterized protein LOC101506393 isoform X3 [Cicer arietinum] |
| trEMBL | tr|K7N0A9|K7N0A9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G44410.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 195549 | 198841 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009714.1 | PF01764.20 | Lipase_3 | 379 | 512 | 3.80E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.581 |
| SRR1783600 | control | 3.639 |
| SRR1783602 | moderate drought stress | 4.142 |
| SRR1811619 | moderate drought stress | 4.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.737 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.651 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.442 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.535 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.291 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.268 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.038 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.542 |
| SRR2868004 | Drought Stress (root) | 6.643 |
| SRR2967015 | Control (root) | 4.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.348 |
| SRR9715740 | Leaf | 0.589 |
| SRR9715741 | Leaf | 0.667 |
| SRR9715739 | Root | 1.126 |
| SRR9715742 | Root | 1.204 |
| SRR9715743 | Root | 0.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.205 |
| SRR8749028 | MeJA induced 9h | 0.126 |
| SRR8749029 | MeJA induced 9h | 0.098 |
| SRR8749030 | Uninduced | 0.271 |
| SRR8749031 | Uninduced | 0.029 |
| SRR8749032 | Uninduced | 0.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.419 |
| SRR8400027 | Control - Root | 13.808 |