Gene detail

Gene detail information of Glyur000121s00009710

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G11070.1	2.00E-44	WRKY family transcription factor
NR	XP_003554762.1	0	PREDICTED: probable WRKY transcription factor 53-like [Glycine max]
Swissprot	tr\|Q8H0Y8\|WRK41_ARATH	1.00E-51	Probable WRKY transcription factor 41
trEMBL	tr\|I1NCK2\|I1NCK2_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA19G44380.1}

Sequence

Transcript Sequence

>Glyur000121s00009710.1
GGATAGTCAAATTTATCTCCTTTACAATTCCCATTACCCTTATTTATAGAATTATAGAATATCCCTCTTCGTCTCNCCTTCCTCAAGCACAAGTCCTCTGTCTATTTCACACTCAGCTTCATCATCACTTTCTCCTCTACTAAGCAACCACTTGTAGCTCACACCCTCCCTNCAGTTTTCCACACCCATTCTTCACTAAGCAAACATTTCACATTTTTCACTGNCCCATTTGGCAATTCAGCAGCTCCTTAATTTGGCCTTGTCTGTCCACTTCTTAGAGTGTCAAAATTCCTTGTAGAGAACAATTCAGCAGTAAATCCTTTGCTGTGCAGTACGCATAAGCTGAATTCAAGGCCTTAGTAGCTGCAACAAAAAGTGGAACAGTAATTCCATTCTTGTTGATATCATTCATTAGTTCATCTTCACAGAATGGAAGAGACTTCCTCCAAGAGGAAACATGTGAGTCTGATCAATGAACTGATCCAAGGGAAGGAGCTGGCAAAGCAGCTAAGTGACCATCTGGTTACTTCTTATGATCCATCAATATCCCATGAAACCAATGAATTATTGATTGAGAAAATACTTTCGACCTACGAGAAAGCACTCACCATGCTGAATTGTGGGTCTAATGTGGGAGATACTAAGACCATCAGTGGCAACATGATGATGGATTCCCATTGCTCTTCCACAAATGAGAGCCCCAGAAGTGAAGTCATGGACCTTGAGTTTAAGCACAAAGCTCTCTTCAAGAAAAGAAAGACCATGCCCAGATGGACAGAGCAAGTGAAGATTTGCTCAGAAACAGGAATTGAGGGGTCTCTGGATGATGGGTATAGCTGGAGAAAATATGGCCAAAAGGGTATTNTTGGAGCCAAGTTTCCCAGAGGATATTACAGATGCACACATAGAAATGCACAAGGGTGCCTGGCAACAAAGCAAGTTCAAAGGTCAGATGAAGATCCAACAATAATTGAGGTGACATACAGAGGAAGACACACATGCACGCAAGCTAAGCATTTGAACAAGGAATCTCCTTCAAAAACAAAGATGGGCTTGGAGGAAAATCAACACCACAACGATCAAAAGAATCAACTAGTACAACAAGAGAAAATGGAGCAAACCCCAGAGGCTATTTTCAAGTTCAAAGCAGAGCTTGAAGTCAAAACANAGGACTTGGAAACCAAGGAGGATATCTTCCCTTGGTTTTGCTTTCCTTCTCCATCAATTGGATCAGAAAACGATTTCATGGAAAGTTTTTCTCCTGCATTCATATCACCGGCCACTTCAGAATCAAACCTTTTCTGTTTGTCAGCATACCCCTTGGGCAGCACTGGANTATGCCAAAACCCACAAACCTCAGAATCTGATATCACTGACACAGTTTCCGCCCCAACTTCAGTCACCAATTCCCCACTCNTGGATTTGGATATTTTGCTTAATAAAGGGGATTTCGACACAGATTTCCCTTTCAACACCCCTGAATATTTCTCTTCATAAAATTTCCCACTTTCACCTAGTTAGCTATAGAGAGTAAGGACAAGAGTCATAACCTTGTTAGCTGTTAATAATCAGGGTAATATATGTCATGTCGATGAATCAAGAAATGGAACCTCCCTGTCATGCCAGTTTGGAGAGCTTTCCTGTATGTAATTTTATGTACCTATTTAGGATGTAATGCGTAAATAAATTGTAGCTGTAGTCTACTACTGCATTTTCTCAATTCATTTGTAATCTATTCAAATGTCTATTTTTGGCTCAAGCAGTGATAGAATCTGTGAAACGAATGAGTTTTCACCTCATGGTTGTCTAGAATTCTGATCAATGGTCAAATCACGCATTTTTGTCTGTCTCTTTCCCCTTGTTAAGAGGCAAAACAAGTTGTTCAAGTGACCCATCCATCAGTTAAGAATTAAGATAGGGAACAAAAAGAAATGAGGCAGATGGATGGTGCATATTATTGTTATATTATTACAAGCAGTCATGTAGTAAAGGTGTAGATGGAGACGAGAGATCACCCATCCTTTTTGCACATTTGATACAATCATCCAATATCATCTTAGCATCATATTTGTATACAAATCCTTTGTCACACAGCTTTGTAGACCCCCACTTGATATCCTTCTTCAGCCCATCTTCATATCTGAAATGTAAACTATAAACAGCTTAAAGGACGAAAACTTTAATTTGTGTTTTCTAAAACTATTATATAATCATATTCAAGTTTGATTTCAATCGTGCTTAAAGGAAGCTATTCCATGGAAAATGTGCATGTTTGATAAGAATGCATGGGTGGATTTGAGATAATACTCAATATCTCTTTTCAAAAGAATTTCTACTATTTAATCCTTTGTGNTTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00121	167179	170297	-

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000121s00009710.1	PF03106.10	WRKY	131	192	3.20E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.064
SRR1783600	control	6.117
SRR1783602	moderate drought stress	3.280
SRR1811619	moderate drought stress	3.064

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	17.417
DRR006520	Root Summer glycyrrhizin high producing strain	17.762
DRR006521	Root Winter glycyrrhizin high producing strain	1.788
DRR006522	Root Winter glycyrrhizin high producing strain	1.691
DRR006523	Root Summer glycyrrhizin low producing strain	46.256
DRR006524	Root Summer glycyrrhizin low producing strain	47.890
DRR006525	Leaf Summer glycyrrhizin high producing strain	39.664
DRR006526	Leaf Summer glycyrrhizin high producing strain	40.786

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.301
SRR2868004	Drought Stress (root)	3.225
SRR2967015	Control (root)	6.278

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	78.541
SRR9715740	Leaf	98.769
SRR9715741	Leaf	90.068
SRR9715739	Root	7.781
SRR9715742	Root	27.683
SRR9715743	Root	18.835

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.191
SRR8749028	MeJA induced 9h	4.746
SRR8749029	MeJA induced 9h	5.035
SRR8749030	Uninduced	2.682
SRR8749031	Uninduced	1.010
SRR8749032	Uninduced	1.057

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.508
SRR8400027	Control - Root	11.077