Gene detail information of Glyur000121s00009703 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53920.1 | 2.00E-52 | GDSL-motif lipase 5 |
| NR | XP_003554796.1 | 1.64E-117 | PREDICTED: GDSL esterase/lipase 5-like [Glycine max] |
| COG | YP_007156891.1 | 7.00E-11 | PEP motif putative anchor domain protein [Anabaena cylindrica PCC 7122] |
| Swissprot | tr|Q9SSA7|GLIP5_ARATH | 4.00E-61 | GDSL esterase/lipase 5 (Precursor) |
| trEMBL | tr|I1NCT6|I1NCT6_SOYBN | 6.00E-118 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G45230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 134223 | 136295 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009703.1 | PF00657.17 | Lipase_GDSL | 172 | 315 | 1.90E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.270 |
| SRR1783600 | control | 0.336 |
| SRR1783602 | moderate drought stress | 0.277 |
| SRR1811619 | moderate drought stress | 0.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.900 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.652 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.476 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.527 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.536 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.315 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.666 |
| SRR2868004 | Drought Stress (root) | 45.839 |
| SRR2967015 | Control (root) | 19.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.594 |
| SRR9715740 | Leaf | 0.475 |
| SRR9715741 | Leaf | 13.274 |
| SRR9715739 | Root | 0.095 |
| SRR9715742 | Root | 0.741 |
| SRR9715743 | Root | 1.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.316 |
| SRR8749028 | MeJA induced 9h | 0.432 |
| SRR8749029 | MeJA induced 9h | 0.354 |
| SRR8749030 | Uninduced | 1.574 |
| SRR8749031 | Uninduced | 0.363 |
| SRR8749032 | Uninduced | 0.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.731 |
| SRR8400027 | Control - Root | 4.153 |