Gene detail information of Glyur000121s00009701 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61670.1 | 7.00E-140 | Protein of unknown function (DUF3133) |
| NR | XP_004494805.1 | 0 | PREDICTED: uncharacterized protein LOC101505003 isoform X1 [Cicer arietinum] |
| Swissprot | tr|O80462|XLG1_ARATH | 2.00E-10 | Extra-large guanine nucleotide-binding protein 1 |
| trEMBL | tr|K7KH30|K7KH30_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G41710.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 125184 | 129802 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009701.1 | PF11331.3 | DUF3133 | 490 | 534 | 2.60E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.011 |
| SRR1783600 | control | 1.079 |
| SRR1783602 | moderate drought stress | 1.247 |
| SRR1811619 | moderate drought stress | 1.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.891 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.832 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.251 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.262 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.457 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.305 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.493 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.516 |
| SRR2868004 | Drought Stress (root) | 8.347 |
| SRR2967015 | Control (root) | 6.338 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.485 |
| SRR9715740 | Leaf | 0.306 |
| SRR9715741 | Leaf | 0.293 |
| SRR9715739 | Root | 1.157 |
| SRR9715742 | Root | 1.521 |
| SRR9715743 | Root | 1.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.620 |
| SRR8749028 | MeJA induced 9h | 1.306 |
| SRR8749029 | MeJA induced 9h | 1.161 |
| SRR8749030 | Uninduced | 0.399 |
| SRR8749031 | Uninduced | 0.160 |
| SRR8749032 | Uninduced | 0.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.936 |
| SRR8400027 | Control - Root | 2.779 |