Gene detail information of Glyur000121s00009699 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46370.4 | 0 | Auxin-responsive GH3 family protein |
| NR | KHN43115.1 | 0 | Putative indole-3-acetic acid-amido synthetase GH3.5 [Glycine soja] |
| COG | NP_870622.1 | 2.00E-22 | auxin-responsive-like protein [Rhodopirellula baltica SH 1] |
| Swissprot | tr|Q6I581|GH35_ORYSJ | 0 | Probable indole-3-acetic acid-amido synthetase GH3.5 |
| trEMBL | tr|I1NCI9|I1NCI9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G44310.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 97077 | 103053 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009699.1 | PF03321.8 | GH3 | 13 | 566 | 2.80E-171 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.112 |
| SRR1783600 | control | 16.211 |
| SRR1783602 | moderate drought stress | 15.986 |
| SRR1811619 | moderate drought stress | 15.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.239 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.169 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 91.343 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 88.699 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 25.303 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.313 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.653 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 54.981 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.507 |
| SRR2868004 | Drought Stress (root) | 46.537 |
| SRR2967015 | Control (root) | 60.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.687 |
| SRR9715740 | Leaf | 29.137 |
| SRR9715741 | Leaf | 36.905 |
| SRR9715739 | Root | 10.610 |
| SRR9715742 | Root | 24.639 |
| SRR9715743 | Root | 19.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.720 |
| SRR8749028 | MeJA induced 9h | 12.803 |
| SRR8749029 | MeJA induced 9h | 7.045 |
| SRR8749030 | Uninduced | 18.505 |
| SRR8749031 | Uninduced | 1.229 |
| SRR8749032 | Uninduced | 1.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.889 |
| SRR8400027 | Control - Root | 33.195 |