Gene detail

Gene detail information of Glyur000121s00009691

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G46270.1	4.00E-76	G-box binding factor 3
NR	XP_003626529.1	0	G-box binding factor [Medicago truncatula]
Swissprot	tr\|Q99089\|CPRF1_PETCR	1.00E-144	Common plant regulatory factor 1
trEMBL	tr\|G7L3Z7\|G7L3Z7_MEDTR	0	BZIP transcription factor family protein {ECO:0000313\|EMBL:AES82747.1}

Sequence

Transcript Sequence

>Glyur000121s00009691.1
ATCCATCCTAGTGTGTCAAACAAAGCACAGAGCTCTTTCCCTCGTTTTTTTTAGAGAGAGAAAATGCACAACCTCAATTTCTCCTCCAAACCTTAACCCTTTTTGAGGATACCTTTTCTCTTTTTTTTCCCCCTTCATTTGGGGTTTCTTGTTGTTTGTTTCTCTGTTGGCACGTTGTTTTTGTGACGACACAAGAGTTGGGTATCTGTCAGTTGAGACATTTTTTGAGAAGTGGCAAGGACTCTGTTTTTCATTCGGTGCTTACAATGGGAAACAGTGAGGAAGAGAAATCTACCAAGACCGAAAAGCCTTCTTCACCTGTAACGATGGATCAGGCCAACCAGACCAACCAGACTAATGTTCATGTCTATCCTGATTGGGCAGCCATNCAGGCATATTATGGGCCAAGAGTTGCCATGCCACCATACTATAACTCAGCTGTGGCTTCTGGTCACACTCCTCACCCGTACATGTGGGGGCCACCACAGCCTATGATGCCACCTTATGGGCCTCCTTATGCAGCAATTTATTCACATGGTGGGGTTTATACTCACCCTGCAGTTCCTATTAATTTCCCGCCTGATCTTATGAATAATGGGCCACATCCACATAGTCAAGGAATTTCATCTTCACCTGCTACTGGTACTCCTTTAAGCATAGAGACTCCTCCCAAATCATCTGGAAATACTGATCAGGGTCTGATGAAGAAATTGAAAGGGTTTGATGGACTTGCGATGTCTATAGGCAATGGGCATGCTGAGAGTGCTGAACCTGGAGCTGAAAACAAGCTATCACAGAGTGTGGATACCGAGGGTTCCAGTGATGGAAGTGATGGCAACACCTCAGGGGCTAGTCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGATGGAGAAGGGAAAACTCAGATACAAGGTAGTCTAGTTTCCAAAGAAATTGCAGCTTCTAATAAGATGATGTCAGTTGCCCCGGCCAGTGTTGCGGGACAATTAGTTGGACCTGTCGTTTCTTCGGCTATGACCACCGCACTGGAGCTGAGAAACCCTTCCAGTGTTCATTCTAAAGCAAATCCCACAAATGCCCCACAACCTTGTGCGGTATTGCCTGCAGAAGCTTGGATACAGAATGAGCGTGAGCTGAAGCGTGAGAGGAGGAAGCAATCAAATCGAGAATCTGCGAGGAGGTCCAGACTAAGGAAGCAGGCCGAGACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATGCTGAGAATGCCTCACTTAAATCAGAATTAAATCGACTGACTGAAAGTTCTGAAAAACTGAGGGTGGAAAATGCTGCATTAAAAGAAAAACTTAAAAATGCTAAACTGGGACAACCAGAAGAGATGATTCTGACCAGCATTGAGAGCCAGAGGGCTACACCTGTAAGTACAGAAAACTTATTATCAAGAGTGAATAATAATTCCAATGATAGTACTGTGGAGGATGAGAATGGTTTTTGTGACAACAAACCGAACTCTGGTGCAAAGCTGCATCAACTACTGGATAAAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGATTACAGAAAAACCAGCAACTGTACCCGGCTGATCATGTAGTTTTGGCATATTACAAGCCCAAAATTACTGCTAACAGTTTTTCTGAGGGATGGATCAGCTGAATTTTAGTATCTAAATCCATCAAAACCAGAACTAATTCATTGCTCATCAATCAATCAATTACTTAGGACATATAAAACTCTGTATTCTATTAGATTTGACAAAAAATGGATTGACTAGTAAAGTTTGTAAAATGAAGAGAACTAGAGATTTTAGTTTAGGGAAGGGTTGTTGAATCGTTGCATAATTGGGGTGTGTGTATTAACGATTGGTGNGGACCTTCTAATGGGGTATTGGTATCTGATAAAGTTATTATGGCTTTTCGTTGTTTGGTTTGTATTCTAATCTTATCTTACAATCAGTTAGATTGTGCATTTTACTTTGGTTTGGCTACAAAAATAATCATTTTCCTACCTACAAAAAATCTACCTTGGCTTTTCCGTTTAAGAGAATAAGTGACGAACAAAGTAAATCTATCTCGAGTTCTCGCTGAAATATATAAAATTAGAATTCCGTGTTGCAATGAGAGGTGGGAAATAAGGGAATGGGCAGAAAAGGCAATTTTGCTGTAACAACCTTGCCTGCATGGCAAAAAGGGCGAAACAATTGGAAACAATGATTTTTTTTTATTTTTGGGTCAAATTGGAAGCAATGATAAAAGGGAAGGGAAGGCTAGGAGAGATAGGGCAGCCAGTCATTTTAGTGGGCTTTTATGTGGGCCAGGGAGGTTACAGAATCCTTTAAATTGGCCCAGCCCATTACGGTTCCATGTTNTTCATAACCCATGCGGCCTATCCCACTATCCCAGTGTTCCCGGTACTGTACGGCANCCACCATGTGCATGAATCATGAATACATGAACTTGTTGGATTTTTTTTTTTGGTCAAAATGAACTTGTTGGATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00121	45014	51049	+

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006351 transcription, DNA-templated

GO:0006355 regulation of transcription, DNA-templated

cellular_component
GO:0005634 nucleus

molecular_function

GO:0003677 DNA binding

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000121s00009691.1	PF07777.6	MFMR	1	195	2.40E-61
Glyur000121s00009691.1	PF00170.16	bZIP_1	291	353	1.70E-19
Glyur000121s00009691.2	PF07777.6	MFMR	1	186	1.90E-65
Glyur000121s00009691.2	PF00170.16	bZIP_1	282	344	1.70E-19

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	32.397
SRR1783600	control	32.773
SRR1783602	moderate drought stress	45.336
SRR1811619	moderate drought stress	44.970

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	64.934
DRR006520	Root Summer glycyrrhizin high producing strain	64.131
DRR006521	Root Winter glycyrrhizin high producing strain	68.093
DRR006522	Root Winter glycyrrhizin high producing strain	65.923
DRR006523	Root Summer glycyrrhizin low producing strain	78.642
DRR006524	Root Summer glycyrrhizin low producing strain	78.404
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.957
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.890

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.237
SRR2868004	Drought Stress (root)	21.183
SRR2967015	Control (root)	33.594

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	26.513
SRR9715740	Leaf	22.415
SRR9715741	Leaf	31.053
SRR9715739	Root	10.846
SRR9715742	Root	30.269
SRR9715743	Root	27.139

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	39.367
SRR8749028	MeJA induced 9h	76.175
SRR8749029	MeJA induced 9h	53.721
SRR8749030	Uninduced	70.972
SRR8749031	Uninduced	118.621
SRR8749032	Uninduced	91.341

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	50.787
SRR8400027	Control - Root	49.871