Gene detail information of Glyur000121s00009687.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61600.2 | 0 | POZ/BTB containin G-protein 1 |
| NR | KHN35353.1 | 0 | BTB/POZ domain-containing protein POB1 [Glycine soja] |
| Swissprot | tr|Q9FPW6|POB1_ARATH | 0 | BTB/POZ domain-containing protein POB1 |
| trEMBL | tr|I1NCH4|I1NCH4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G44170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00121 | 16066 | 19889 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | BTB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000121s00009687.1 | PF00651.26 | BTB | 139 | 237 | 2.10E-12 |
| Glyur000121s00009687.1 | PF07707.10 | BACK | 262 | 354 | 2.70E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.668 |
| SRR1783600 | control | 22.669 |
| SRR1783602 | moderate drought stress | 19.284 |
| SRR1811619 | moderate drought stress | 18.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.004 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.529 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.197 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.438 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.283 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 18.514 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.713 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.281 |
| SRR2868004 | Drought Stress (root) | 25.149 |
| SRR2967015 | Control (root) | 26.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.122 |
| SRR9715740 | Leaf | 19.913 |
| SRR9715741 | Leaf | 27.300 |
| SRR9715739 | Root | 32.079 |
| SRR9715742 | Root | 35.109 |
| SRR9715743 | Root | 36.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.327 |
| SRR8749028 | MeJA induced 9h | 11.645 |
| SRR8749029 | MeJA induced 9h | 6.798 |
| SRR8749030 | Uninduced | 5.706 |
| SRR8749031 | Uninduced | 5.345 |
| SRR8749032 | Uninduced | 8.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.502 |
| SRR8400027 | Control - Root | 27.476 |