Gene detail information of Glyur000120s00006119 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10770.1 | 2.00E-144 | oligopeptide transporter 7 |
| NR | XP_007156168.1 | 0 | hypothetical protein PHAVU_003G263900g [Phaseolus vulgaris] |
| Swissprot | tr|O82485|OPT7_ARATH | 0 | Oligopeptide transporter 7 |
| trEMBL | tr|W9QW32|W9QW32_9ROSA | 0 | Oligopeptide transporter 7 {ECO:0000313|EMBL:EXB39949.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00120 | 326925 | 332084 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000120s00006119.1 | PF03169.10 | OPT | 46 | 383 | 6.80E-80 |
| Glyur000120s00006119.1 | PF03169.10 | OPT | 384 | 610 | 1.40E-61 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.591 |
| SRR1783600 | control | 10.692 |
| SRR1783602 | moderate drought stress | 18.557 |
| SRR1811619 | moderate drought stress | 18.693 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.264 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.848 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 45.355 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.806 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.502 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.061 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.206 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.585 |
| SRR2868004 | Drought Stress (root) | 12.165 |
| SRR2967015 | Control (root) | 23.733 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.098 |
| SRR9715740 | Leaf | 7.711 |
| SRR9715741 | Leaf | 9.258 |
| SRR9715739 | Root | 8.327 |
| SRR9715742 | Root | 7.102 |
| SRR9715743 | Root | 6.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.124 |
| SRR8749028 | MeJA induced 9h | 9.463 |
| SRR8749029 | MeJA induced 9h | 6.022 |
| SRR8749030 | Uninduced | 16.165 |
| SRR8749031 | Uninduced | 9.377 |
| SRR8749032 | Uninduced | 11.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.030 |
| SRR8400027 | Control - Root | 7.683 |