Gene detail information of Glyur000120s00006113 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10770.1 | 0 | oligopeptide transporter 7 |
| NR | XP_004511249.1 | 0 | PREDICTED: oligopeptide transporter 7-like [Cicer arietinum] |
| Swissprot | tr|O82485|OPT7_ARATH | 0 | Oligopeptide transporter 7 |
| trEMBL | tr|G7LDQ5|G7LDQ5_MEDTR | 0 | Oligopeptide transporter OPT family protein {ECO:0000313|EMBL:AET03013.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00120 | 305365 | 311878 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000120s00006113.1 | PF03169.10 | OPT | 59 | 717 | 3.00E-172 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.024 |
| SRR1783600 | control | 1.996 |
| SRR1783602 | moderate drought stress | 3.532 |
| SRR1811619 | moderate drought stress | 3.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.373 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.332 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.891 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.920 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.393 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.426 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.970 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.805 |
| SRR2868004 | Drought Stress (root) | 23.122 |
| SRR2967015 | Control (root) | 19.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.481 |
| SRR9715740 | Leaf | 6.549 |
| SRR9715741 | Leaf | 10.449 |
| SRR9715739 | Root | 7.056 |
| SRR9715742 | Root | 4.965 |
| SRR9715743 | Root | 5.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.404 |
| SRR8749028 | MeJA induced 9h | 1.704 |
| SRR8749029 | MeJA induced 9h | 1.304 |
| SRR8749030 | Uninduced | 1.510 |
| SRR8749031 | Uninduced | 1.287 |
| SRR8749032 | Uninduced | 1.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.479 |
| SRR8400027 | Control - Root | 9.932 |