Gene detail information of Glyur000120s00006111 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17850.1 | 7.00E-24 | Rhodanese/Cell cycle control phosphatase superfamily protein |
| NR | XP_003547926.1 | 1.40E-61 | PREDICTED: rhodanese-like domain-containing protein 17-like [Glycine max] |
| COG | YP_006417164.1 | 2.00E-06 | Rhodanese-related sulfurtransferase [Aequorivita sublithincola DSM 14238] |
| Swissprot | tr|Q9FKW8|STR18_ARATH | 2.00E-35 | Thiosulfate sulfurtransferase 18 |
| trEMBL | tr|K7MGZ8|K7MGZ8_SOYBN | 5.00E-62 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G23610.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00120 | 296999 | 299051 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.028 |
| SRR1811619 | moderate drought stress | 0.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.441 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.433 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.840 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.531 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.969 |
| SRR2868004 | Drought Stress (root) | 28.195 |
| SRR2967015 | Control (root) | 15.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.405 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.024 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.129 |
| SRR9715743 | Root | 0.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.200 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.944 |
| SRR8400027 | Control - Root | 1.158 |