Gene detail information of Glyur000120s00006100 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35980.1 | 4.00E-32 | |
| NR | KDP45975.1 | 3.58E-49 | hypothetical protein JCGZ_11878 [Jatropha curcas] |
| trEMBL | tr|A0A067LME1|A0A067LME1_JATCU | 1.00E-49 | Uncharacterized protein {ECO:0000313|EMBL:KDP45975.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00120 | 244176 | 246712 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.146 |
| SRR1783600 | control | 17.110 |
| SRR1783602 | moderate drought stress | 19.419 |
| SRR1811619 | moderate drought stress | 19.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.571 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.693 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.752 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 26.506 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 41.609 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 41.568 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.098 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 55.114 |
| SRR2868004 | Drought Stress (root) | 50.145 |
| SRR2967015 | Control (root) | 44.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.314 |
| SRR9715740 | Leaf | 28.447 |
| SRR9715741 | Leaf | 24.807 |
| SRR9715739 | Root | 27.169 |
| SRR9715742 | Root | 24.644 |
| SRR9715743 | Root | 24.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.682 |
| SRR8749028 | MeJA induced 9h | 13.053 |
| SRR8749029 | MeJA induced 9h | 20.832 |
| SRR8749030 | Uninduced | 19.140 |
| SRR8749031 | Uninduced | 18.192 |
| SRR8749032 | Uninduced | 24.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 72.981 |
| SRR8400027 | Control - Root | 71.845 |