Gene detail information of Glyur000120s00006086 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66090.1 | 6.00E-61 | |
| NR | XP_007156195.1 | 1.35E-112 | hypothetical protein PHAVU_003G266300g [Phaseolus vulgaris] |
| COG | YP_007047209.1 | 3.00E-07 | universal stress protein UspA-like protein [Cyanobium gracile PCC 6307] |
| trEMBL | tr|V7CDJ6|V7CDJ6_PHAVU | 5.00E-113 | Uncharacterized protein {ECO:0000313|EMBL:ESW28189.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00120 | 184450 | 186860 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 73.913 |
| SRR1783600 | control | 74.541 |
| SRR1783602 | moderate drought stress | 64.760 |
| SRR1811619 | moderate drought stress | 64.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 65.025 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 63.290 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.012 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.427 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 85.830 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 86.754 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 43.588 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 43.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.681 |
| SRR2868004 | Drought Stress (root) | 40.987 |
| SRR2967015 | Control (root) | 36.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 51.655 |
| SRR9715740 | Leaf | 74.773 |
| SRR9715741 | Leaf | 56.757 |
| SRR9715739 | Root | 38.117 |
| SRR9715742 | Root | 32.247 |
| SRR9715743 | Root | 33.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.867 |
| SRR8749028 | MeJA induced 9h | 12.305 |
| SRR8749029 | MeJA induced 9h | 9.008 |
| SRR8749030 | Uninduced | 4.765 |
| SRR8749031 | Uninduced | 2.029 |
| SRR8749032 | Uninduced | 2.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 68.481 |
| SRR8400027 | Control - Root | 66.644 |