Gene detail information of Glyur000120s00006082 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35880.1 | 0 | Eukaryotic aspartyl protease family protein |
| NR | AET03725.2 | 0 | eukaryotic aspartyl protease family protein [Medicago truncatula] |
| Swissprot | tr|Q9LX20|ASPL1_ARATH | 9.00E-83 | Aspartic proteinase-like protein 1 (Precursor) |
| trEMBL | tr|G7LB52|G7LB52_MEDTR | 0 | Eukaryotic aspartyl protease family protein {ECO:0000313|EMBL:AET03725.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00120 | 161231 | 164698 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000120s00006082.1 | PF14543.1 | TAXi_N | 100 | 261 | 1.90E-26 |
| Glyur000120s00006082.1 | PF14541.1 | TAXi_C | 281 | 420 | 1.40E-21 |
| Glyur000120s00006082.2 | PF14543.1 | TAXi_N | 100 | 261 | 8.60E-27 |
| Glyur000120s00006082.2 | PF14541.1 | TAXi_C | 281 | 348 | 2.60E-08 |
| Glyur000120s00006082.3 | PF14541.1 | TAXi_C | 7 | 76 | 4.30E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.858 |
| SRR1783600 | control | 17.974 |
| SRR1783602 | moderate drought stress | 11.058 |
| SRR1811619 | moderate drought stress | 11.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.932 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.237 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.953 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.002 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.847 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.518 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.577 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.573 |
| SRR2868004 | Drought Stress (root) | 4.614 |
| SRR2967015 | Control (root) | 5.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.588 |
| SRR9715740 | Leaf | 0.328 |
| SRR9715741 | Leaf | 0.669 |
| SRR9715739 | Root | 7.726 |
| SRR9715742 | Root | 7.928 |
| SRR9715743 | Root | 8.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.308 |
| SRR8749028 | MeJA induced 9h | 0.104 |
| SRR8749029 | MeJA induced 9h | 0.276 |
| SRR8749030 | Uninduced | 0.064 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.673 |
| SRR8400027 | Control - Root | 30.532 |