Gene detail information of Glyur000120s00006055 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35720.1 | 6.00E-28 | Arabidopsis protein of unknown function (DUF241) |
| NR | XP_007156220.1 | 2.39E-170 | hypothetical protein PHAVU_003G268400g [Phaseolus vulgaris] |
| trEMBL | tr|V7CDL7|V7CDL7_PHAVU | 9.00E-171 | Uncharacterized protein {ECO:0000313|EMBL:ESW28214.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00120 | 57423 | 58373 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000120s00006055.1 | PF03087.9 | DUF241 | 63 | 313 | 1.10E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.834 |
| SRR1783600 | control | 3.580 |
| SRR1783602 | moderate drought stress | 2.968 |
| SRR1811619 | moderate drought stress | 2.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.903 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.237 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.521 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.932 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.701 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.182 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.626 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.171 |
| SRR2868004 | Drought Stress (root) | 7.693 |
| SRR2967015 | Control (root) | 8.406 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.126 |
| SRR9715740 | Leaf | 0.248 |
| SRR9715741 | Leaf | 0.069 |
| SRR9715739 | Root | 1.659 |
| SRR9715742 | Root | 2.842 |
| SRR9715743 | Root | 2.920 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.627 |
| SRR8749028 | MeJA induced 9h | 19.022 |
| SRR8749029 | MeJA induced 9h | 19.221 |
| SRR8749030 | Uninduced | 20.889 |
| SRR8749031 | Uninduced | 6.631 |
| SRR8749032 | Uninduced | 6.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.362 |
| SRR8400027 | Control - Root | 2.412 |