Gene detail information of Glyur000120s00006054 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KGN55623.1 | 2.49E-09 | hypothetical protein Csa_3G002440 [Cucumis sativus] |
| trEMBL | tr|A0A0A0L1K1|A0A0A0L1K1_CUCSA | 9.00E-10 | Uncharacterized protein {ECO:0000313|EMBL:KGN55623.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00120 | 56301 | 58027 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.375 |
| SRR1783600 | control | 2.926 |
| SRR1783602 | moderate drought stress | 2.645 |
| SRR1811619 | moderate drought stress | 3.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.606 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.848 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.687 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.936 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.114 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.471 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.483 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.184 |
| SRR2868004 | Drought Stress (root) | 4.734 |
| SRR2967015 | Control (root) | 5.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.394 |
| SRR9715740 | Leaf | 0.181 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.111 |
| SRR9715742 | Root | 1.575 |
| SRR9715743 | Root | 0.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.262 |
| SRR8749028 | MeJA induced 9h | 31.111 |
| SRR8749029 | MeJA induced 9h | 11.764 |
| SRR8749030 | Uninduced | 23.038 |
| SRR8749031 | Uninduced | 8.729 |
| SRR8749032 | Uninduced | 4.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.860 |
| SRR8400027 | Control - Root | 1.937 |