Gene detail

Gene detail information of Glyur000119s00012190

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G18670.1	0	Protein kinase superfamily protein
NR	XP_004491856.1	0	PREDICTED: probable serine/threonine-protein kinase At1g54610-like isoform X1 [Cicer arietinum]
COG	YP_007468874.1	7.00E-23	serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprot	tr\|Q9ZVM9\|Y1461_ARATH	2.00E-169	Probable serine/threonine-protein kinase At1g54610
trEMBL	tr\|G7L344\|G7L344_MEDTR	0	Cyclin-dependent kinase C {ECO:0000313\|EMBL:AES77534.2}

Sequence

Transcript Sequence

>Glyur000119s00012190.1
ATGGGCTGTGTCAACTCGAAGAAAGCGGTGGCCGGAGCCGTTTCCGATTCGCCGGCGGCGGGACCTTATGTTCACTCGAGCTCGAGGAAACGGAGCAATGGTAATTCAGGGCGAAGCACGGTGGTGGAGCCACCGGCGGCGTCGTCGTCGCGTTCCTCCACCAGGGGACATTCCGGCACGGNGGCGGTGACGACGGCGATCTCGACCCAACAGGTGGGTGACCAGAAATCCGAGGAGTGGAAGAAGGGGAACCTGAGCATGAGGCTTGGTTTGTCACATAGGTTTGTGGAGGCAGAGCAGAATGCAGCTGGTTGGCCTTCTTGGCTNACCTCTGTTGCTGGGGAAGCTATTCATGGATGGGTCCCTCTCAAAACTGATTCTTTTGAAAAATTAGATAAGATTGGACAAGGTACATATAGCAGTGTGTTCCGAGNACGTGAAGTTGAAACAGGGAGGATGGTTGCCCTGAAGAAGGTTCGGTTTGACACNCTTCAACCCGAGAGCATTAGGTTCATGGCAAGAGAAATAATAATCCTCCGCACACTTGACCACCCAAACATCATGAAATTAGAGGGCATAATCACTTCACAAATGTCAAATAGCATATACCTTGTATTTGAATACATGGAGCATGATCTTTCTGGCCTAGTATCTTCCCCCGATATCAAGTTCACTGACACACAGATTAAGTGTTACATGAGACAGCTATTAAGTGGACTTGAGCATTGTCACCTAAGAGGCATCATGCATCGAGACATTAAAGTATCAAACATATTAGTGAGCAATGAAGGCATTCTCAAGATAGGAGATTTTGGATTAGCAAATACCGTTAGCCCAAATAGCAAGCACCCTTTAACAAGCCGTGTAGTGACTCTATGGTATCGTCCTCCCGAGCTTTTGATGGGATCAACAAACTATGGAGTTTCAGTGGATCTGTGGAGTGTTGGCTGTGTATTTGCTGAACTTTTTCTGGGGAAGCCCATCCTTAAGGGTAGAACTGAGGTGGAACAATTGCACAAAATTTTTAAGCTTTGTGGGTCTCCACCTGATGAGTATTGGAAAAAGTGTAAGCTTCCTCTTGCAACAATGTTTAAGCCTCAGACTAGTTATGAAAGCTCCCTTCAGGAGAGGTGTAAAGGATTTCCTGCAACTGCTGTAAACCTTCTTGAGACCTTACTGTCCATTGATCCTTACAAGCGTGGGACTGCCTCCTCTGCACTTATGTCTGAGTACTTCAGCACCATGCCATATGCTTGTAGTCCATCACTCTTGCCAAAGTATCCACCAACCAAAGAAATGGATGTTAAAAACAGAGAAGCTATGCGCAGGAAAAAGAATGGAGGTAAAGTGCGAGAGCGAGAGGCTGTAACATCAAGAAGGCAAAGACGAGTCCATAAAGATCCTAACAATGTCAAAAAACCAGCTTTGAAGGAGGGAATGCAGAATATTTCTCAAAATGCTTGTAGAGATGATGATGGTAAAGCACATATTACAAAGGGAAAAGTAGGAGGCATGCACAAAGAGCAACAAAAGCCTTCATATGATGCAAAATCAGAGGCTTCCCAAGTGATGAATGGTTGCAATGGCTATAGTGGTGCATACTCAGGACCAGCACCAGTTACGGGATCTAGTGGCTTTACATGGGCAAAAAGGAGAAAACCAGATGCTTCATCCATATTATCAGATGGCTCAAGAAGCAAAATCAGTGCACTGGATCCAACCTTTGCAAAAGGCACCTATGATTTAACAAAACATGGGATAGAAGTTTCAGAAAGAAAACACAATTACAACAACAACAACAGAAGCCATATTCAGGATGAGACTTCCAAGCATGTATCACAAAAGCAATGGGGTCGTAATGGTCGATGGGAATCATTTGATGGTGCTGATACATACCGTTCAAATTATTACATGGAATTTGATCTCACAGAAAAGAAGGATGCTCTGATAAATATTCAGGGCCACAGAAAACATGGTGAGGCTGTGGAACAATCAGTACCAACATTGATCCAAANAAATACAAATGATGACTTGTTGCATTGGAATGACAATAGTATGCAGGGATATGTTCGCAAATCAAGGCTTGGAAGAGGTAAAGAAACTATTTTTACAAATGACTCCAAGGACTATTGGGATAGAGTAATCCCCACCTCTACAAGGGTGCTTGACTAAACAACATTGTGGCCAATGATGGACTCTATTAACCATATTAACTTCTGACTTTTCAGCTCCCCCTGACACATCTTTGGCGACACTATCCCTTCTTTTGTTCATAACAAAGTGTTCATCCAGCCAGGTTTATCATACATAGGAGTAACACTGAAATATATATAGGATTACAGTAACAAGAGTATATAATGCCAACATGGAAGATGATATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00119	288892	293853	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000119s00012190.1	PF00069.20	Pkinase	128	412	3.70E-65

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.773
SRR1783600	control	3.773
SRR1783602	moderate drought stress	2.956
SRR1811619	moderate drought stress	3.011

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.415
DRR006520	Root Summer glycyrrhizin high producing strain	2.476
DRR006521	Root Winter glycyrrhizin high producing strain	1.729
DRR006522	Root Winter glycyrrhizin high producing strain	1.636
DRR006523	Root Summer glycyrrhizin low producing strain	1.626
DRR006524	Root Summer glycyrrhizin low producing strain	1.622
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.556
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.553

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.859
SRR2868004	Drought Stress (root)	3.297
SRR2967015	Control (root)	3.536

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.992
SRR9715740	Leaf	1.472
SRR9715741	Leaf	1.164
SRR9715739	Root	0.126
SRR9715742	Root	0.761
SRR9715743	Root	0.434

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.457
SRR8749028	MeJA induced 9h	2.319
SRR8749029	MeJA induced 9h	4.831
SRR8749030	Uninduced	1.167
SRR8749031	Uninduced	0.661
SRR8749032	Uninduced	0.923

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.351
SRR8400027	Control - Root	8.471