Gene detail information of Glyur000119s00012146 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G15260.1 | 1.00E-52 | Ribosomal protein L34e superfamily protein |
| NR | XP_004491814.1 | 6.04E-123 | PREDICTED: uncharacterized protein At5g19025-like [Cicer arietinum] |
| Swissprot | tr|P0C8Q9|Y5902_ARATH | 6.00E-22 | Uncharacterized protein At5g19025 |
| trEMBL | tr|I1L5W7|I1L5W7_SOYBN | 5.00E-119 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G37180.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00119 | 58212 | 60577 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.459 |
| SRR1783600 | control | 12.985 |
| SRR1783602 | moderate drought stress | 9.554 |
| SRR1811619 | moderate drought stress | 9.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.917 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.784 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 72.879 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 69.518 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.253 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.419 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.327 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.152 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 41.979 |
| SRR2868004 | Drought Stress (root) | 64.560 |
| SRR2967015 | Control (root) | 75.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 154.535 |
| SRR9715740 | Leaf | 186.996 |
| SRR9715741 | Leaf | 190.039 |
| SRR9715739 | Root | 265.112 |
| SRR9715742 | Root | 169.061 |
| SRR9715743 | Root | 192.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 66.951 |
| SRR8749028 | MeJA induced 9h | 66.160 |
| SRR8749029 | MeJA induced 9h | 67.709 |
| SRR8749030 | Uninduced | 80.927 |
| SRR8749031 | Uninduced | 83.733 |
| SRR8749032 | Uninduced | 110.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 62.771 |
| SRR8400027 | Control - Root | 66.488 |